rs31076497 SNP Detail

Summary

• ID
  rs31076497
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:14202038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGTGGAA AGAACACACT
  AAATGCCAAG GTTTTAAAGA CAGTGTCTCA CAGAAATGAC TATAAATAGC AGCTCAGGAG
  GCCACTTACA CGAAGTTAGG CCCATTTTAG ACTAGTGGCT ATCACAGTGT AAGCTCATCA
  TAACTTGATT CAAGTTCAAT GAGCGGGAAG TAAGGATGAC CAGCCAGTGT GAGAAAGCTA
  S
  GTGGAGATCA GATAACCACA TTAAAAAGAT TAAAATGCTC AGCCAGCTAT AAATGCCTGC
  TAAACTCCTA AAAAGGAGTC TGAAGAGACC CATAAAATTG TGAGGAAGAA AGTAAGGGAG
  CCGGAAGCTT TAACCAGATG TTCTGTGATA TGAATGACTA TGTTAGTAAA TTTTCATTCC
  AGCAATATGG CTTTGTATTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	PWD/PhJ
ss49201233	NES12682571	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	PWD/PhJ
rs31076497					SNP	G	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49201233	NES12682571	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:14202038 () rs orientation: forward

Symbol	Name	Function Class
AU018823	expressed sequence AU018823	396 bp proximal
Gm58621	predicted gene, 58621	within coordinates
Rr356066	regulatory region 356066	1670 bp distal