rs31079031 SNP Detail

Summary

• ID
  rs31079031
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45024616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGTGCTCTCA TGACCACACA GAGCAGCTCA GGGGTAGGGA CAGGCCTCAA CGGTTTGTAA
  TTTTTTCAAG GATGTGAATA CAGTGGCTAT TTCTCACTAA TAAGAATGAT AAGTGGATTG
  GAGAGATGAC TCGGCTGTTA AAAGAGCACT GACTGCTCTT GCAGAGGTCC TGAGTTCAAT
  TCCCAGCAAC CACATGGTGG CTCACAACCA CCTGTAATGG GATCCTATAC CCTCTTCTGG
  AATGTCTGAA GAGCACAGGG TACTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTATATAT
  M
  TATATATATA TATATATATA TATATATATA GTGAGAGAGA GAGAAAAGTA CACATCTTGA
  AGGCAAACAG TATGATGGTT CTAATTGGGA GGGGAAGAAA CACAGGATTG ATATTCCCTG
  AAGAAGGGTC ACTAGATCTT CAACTGAGTC ACTACCTGCA CAAAATCAAG GCCAGCCTGT
  CTAAATGGGT TCCAGGACAT CGAGGGCCAC AGAGAGAAAC TGTCACCAAA ACCCAAAACA
  AACCAAAACA ATCAAATAAA CAAAAACAGC TCCCCCATCC CCCCAAAAGA AAGAAATCCC
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss45994145	mCV22694746	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs31079031					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45024616 () rs orientation: forward

Symbol	Name	Function Class
Snrnp70	small nuclear ribonucleoprotein 70 (U1)	1261 bp downstream
Tssr66520	transcription start site region 66520	1978 bp upstream