rs31083537 SNP Detail

Summary

• ID
  rs31083537
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:37526723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACTG GCCAGTGCCT TCTGAAATGT
  R
  TGCCTTTGCT CGTGGAGTCA CTAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss44993912	mCV24511776	ABI	CRAMUS_MOUSE	f	SNP		G				A		G
ss50794271	NES13548043	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A		G	G	G	G		G	G	G		G
ss146352493	ENSMUSSNP3258238	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						G
ss325799094	CHEV_19_37612765	CHEVERUD	SCREENING_POP	f	SNP											G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31083537					SNP	G	G	G	G	A	A	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50794271	NES13548043	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:37526723 () rs orientation: forward

Symbol	Name	Function Class
Exoc6	exocyst complex component 6	within coordinates
Gm59222	predicted gene, 59222	within coordinates
Rr364833	regulatory region 364833	323 bp distal
Rr364834	regulatory region 364834	1079 bp proximal
Tssr156225	transcription start site region 156225	1640 bp downstream
Tssr156226	transcription start site region 156226	1618 bp downstream
Tssr156227	transcription start site region 156227	1453 bp downstream
Tssr156228	transcription start site region 156228	1277 bp downstream