rs31083571 SNP Detail

Summary

• ID
  rs31083571
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:109370531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGAAAAGT AGGAGAAGGC
  AAAAGGACAA GGCAAGAGAG GTGGAAGAAA AGGAGGAGAA CCTATTTCAG GGTGGACATG
  AGAGTTAAAA ACTGAATTGT GTGAAGTCTT TGAAGTGGTG CCTGTGCACA GTATATTCCA
  TGGGTTTGCT CTTTCTTCTA TTGTATTATG TTTCTCACTG CAAGTCACCG CTGAGCACAC
  R
  ACTTCTACAA GGATGGTGAG CTGTCTCTCT ACTCACATAT ATATGTTTTC CCTTGACAGC
  CAGAATCATA GATTGTTTTT ACTGCTGCTG TTGCTGCTGC TGCTACTGCT GCTAAATTTT
  AACAAGTGCT GCTGTGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTATGTAT
  ATATGTATGT ATGTATTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47514811	NES11206479	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31083571					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47514811	NES11206479	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:109370531 () rs orientation: forward

Symbol	Name	Function Class
Rr182707	regulatory region 182707	1700 bp proximal
Rr382625	regulatory region 382625	1368 bp upstream
Zfhx3	zinc finger homeobox 3	within coordinates