rs31084844 SNP Detail

Summary

• ID
  rs31084844
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:63443801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTGAGGA AGCTCATGCA
  GACAGCCAAC TTAGGAAGGG TGCATCAACA GGTCAAAAGA GGCAGTGGGC AGCTGAATTT
  TTAAAAATCT GAGTAAAAGA TGAGGATTTA AACAAAAGAA AAGGCTTGGA AATTGAGAAG
  AGAAGTTGAT ATAATGGATT TTAGATCTAA ATCAAGAAGA CATTAAGAAT GAAGTCTTCA
  R
  ACTGTTATAA TCTAGGGAAT AAAATGGCAT AGACATCTAA AAGGACTCAC ACTGGCTGGA
  GTAATTGGCC AGTGATGAAG ATATTGATGC ATCTCTTTGA TGCAATCTTC AAGAGAACAT
  CAGTTTTAAG GCCAGCTGTT GGAACATTGG AAGAGGGGAA GCAGTTGAAG ATGTTTATTC
  TCAAATCTAC CAGTTGTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48014489	NES12051147	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G		A	A	G	A
ss148011083	ENSMUSSNP1563913	ENSEMBL	ENSEMBL_Sanger	f	SNP		A										G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31084844					SNP	A	A	A	A	A	A	A	A	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48014489	NES12051147	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:63443801 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7134	CpG island 7134	1005 bp proximal