rs31084850 SNP Detail

Summary

• ID
  rs31084850
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:63445118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGGACGA GGAGGAGGAC
  GAGGAGGAGG ACGAGGAGGA GGATGAGGAG GAGGACGAGG ACGAGGAGGA CGAGGAGGAT
  GAGGAGGACG AGGAGGGGGA CGAGGACAAG GACGAGGACG AGGAGGACGA GGAGAATGAG
  GAGGACGAGC ACGATGAGGA CAAGGAGGAG GAGGAGAAGA AGAGATATCA GTGAAGGGCT
  W
  ATGGTCTCTG TGAGAAAAAT GAGTTAATGA AAGTTAGGAA ATCATATACA AACAAACATC
  ACAATCTGAA TTCAGCTATC AGATGCTCAA GTGAGACACT GTGAGATTAA ACTGGTGTAA
  GGTTGGATTT TGTTTTAAAG ATGAAGAAGC AGGAATGTCA TTTTATGAAC GTAAGAATGG
  AATGTTAGCC CCAAACAGCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48014495	NES12051122	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31084850					SNP	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48014495	NES12051122	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:63445118 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7134	CpG island 7134	within coordinates