rs31085351 SNP Detail

Summary

• ID
  rs31085351
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:63548154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTTCAGCT TTTAACAAAC
  ATGAAAATGA ACAGTGTCCC GAAAACACTG GGGCATTCGA TGAAGGATGA AGCCCTTTCC
  AAACTCCAGC TATCCACACA TCATCTTAGG TGGCTTTGAT AACCTCTTGG CTATAGACCC
  TCCATCTTTA TGTCAACAGT AAAAATAGCA TAAATGTACA ACAGCACAGA ATAGCATTGT
  R
  TATGGTTCAT TGGAAGTGCA CCAGGCATGA GTCGTGTTAA CACAGTGGTT CTCAACCTTC
  CTAATGCTGT GACCTTTTAA TACAGTTCCT CATGTCCTTA TGTTGTGGTG ACCCCCACCC
  CAACCATTTT CATTGCTACT TCACAACAGT AATTTTGCTA ATGTTATGAA CTGTAATGTA
  AATATCTAAT ATGTAGGTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48014705	NES12049623	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31085351					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48014705	NES12049623	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:63548154 () rs orientation: forward

Symbol	Name	Function Class
Rr1380	regulatory region 1380	56 bp distal
Rr390832	regulatory region 390832	within coordinates
Rr406926	regulatory region 406926	within coordinates