rs31085667 SNP Detail

Summary

• ID
  rs31085667
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:63445462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCTTTGAAA GGAAACAGTA AAGACAAGGT CACTTAAGTT
  TGCATGACAC ATAGAGAGCA AGGGAAAGAT GGAAAGATCT AAAAATAAAG GATGGAGAAT
  R
  GAATCCAGAG TTCCCAGTTT AAGGAGAACA GAAAAAAAAA ATGGTCATAA GAATAAATGA
  TGGCAAAAGT AAACAGAGGG AAATTAGAGT GAAGAACCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39393461	mCV22696674	ABI	CRAMUS_MOUSE	f	SNP		A	G					A		G
ss48014503	NES12051126	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	A	A		G	G	A	A		A	A	G		G
ss148011095	ENSMUSSNP5496619	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G							G
ss324992811	CHEV_15_63405168	CHEVERUD	SCREENING_POP	f	SNP													G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31085667					SNP	A	A	G	G	A	A	A	A	G	G	A	A	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48014503	NES12051126	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:63445462 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7134	CpG island 7134	336 bp distal