rs31085867 SNP Detail

Summary

• ID
  rs31085867
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126358240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACCCACAT GGTGGAAGGA
  ATCAGATGTC CTCTGACCTC CACACAGGCT CTGTGACATA CTTACGCTCC AACACACAAA
  ATTAATAAAT GTGGCAAATA AACGAATAAG AAATTATGGA AGCTGGGCAT GGTGATACAT
  ACAGCTTCTA ACTAATCCTA GCACTGGCGA GTTAGTATGT TGAGGCCAGC CTGGTTACCT
  R
  GTCTACATAG TGAGTTCTGG AACAGCCAGT TCCATGTCAA GAGACCCTCT TAAAAAAGAA
  AGAGAGAGAG AAAAGAAAGG ATGGAGATGT GGCTCAGTGG TAGGATGCTT GCCTAGTAGC
  ATCCTGAATC TGTATGATGG CTCAGGCCTA AAGGCAGGAG GATGTGTTCA AGGCCAACCT
  CCACCACATA GAGAGCCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45995388	mCV25164749	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31085867					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126358240 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19709	CpG island 19709	148 bp proximal
Mapk3	mitogen-activated protein kinase 3	558 bp upstream
Rr655591	regulatory region 655591	43 bp proximal
Rr655592	regulatory region 655592	1039 bp proximal
Tssr69058	transcription start site region 69058	530 bp upstream
Tssr69059	transcription start site region 69059	545 bp upstream
Tssr69060	transcription start site region 69060	614 bp upstream
Tssr69061	transcription start site region 69061	661 bp upstream
Tssr69062	transcription start site region 69062	712 bp upstream
Tssr69063	transcription start site region 69063	1523 bp upstream
Tssr69064	transcription start site region 69064	1579 bp upstream
Tssr69065	transcription start site region 69065	1630 bp upstream