rs31090525 SNP Detail

Summary

• ID
  rs31090525
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28527359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC CCACCCAATG ATTTTTTTTT
  W
  AATTTTATTT TATGTGCATT GGTGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss45995707	mCV24572460	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss322126533	CHEV_7_29612953	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs31090525					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28527359 () rs orientation: forward

Symbol	Name	Function Class
Ech1	enoyl coenzyme A hydratase 1, peroxisomal	within coordinates
Rr155798	regulatory region 155798	759 bp distal
Rr167384	regulatory region 167384	1358 bp distal
Rr380577	regulatory region 380577	1993 bp downstream
Tssr65551	transcription start site region 65551	410 bp downstream
Tssr65552	transcription start site region 65552	302 bp downstream