rs31091290 SNP Detail

Summary

• ID
  rs31091290
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126219492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCTCTAG TTCTACTAAG
  GAATCCCCGA AACTGAGAGA ATCAGACATT ATATGCACGA GATGAAAACG GGGTGGAAAA
  GAGGGACATT CTGCCCAGGG TCCTTCCTGA TCTGAGATCT CCGAGGTTCT AAGAATTGCT
  GTAACAGTTC CTGGCACAGA GGCTGTGCCA GAGACAGGTG AGGCAGAGGG CTGTCAATCA
  R
  AGGTTAAGAG TAAGTGGTGG CGTGTTCATC TCCTAAGAAG CAGGTGCTCA AGGGTCCAGC
  AGCTAGGACT GGCCATTGAC ACTGAGGACG GGTGTTCTTG ACCTTAATTT TCTGTCTGAC
  GGAAGGAAGG TTGTTTTCGA ACCCATCCTT AGAAGATCTA CAATCTAGGG TTGCTCATTG
  CCCAGAACCC CGTGTTTCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45994783	mCV22749705	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss145875034	ENSMUSSNP2943518	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31091290					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126219492 () rs orientation: forward

Symbol	Name	Function Class
Gm39086	predicted gene, 39086	1839 bp upstream
Gm39087	predicted gene, 39087	1379 bp upstream
Rr655535	regulatory region 655535	461 bp distal
Rr655536	regulatory region 655536	1140 bp proximal
Rr655537	regulatory region 655537	1573 bp proximal