rs31091508 SNP Detail

Summary

• ID
  rs31091508
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:176540617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTAACTGAA GAATTAGGCT TTAATTTTAC TTATTTGTTT GTTTGTTTGT TTTTTATTGC
  TTGAAATGTA AGCACTGCAC AGGACTGGAA CTTAAGGCTG TTTGTTATTT TGAAGTTGGT
  GTCTTCTTTG ATCACAAGCC ATACTTCTTA GCCCTCAACC ACCTCACCCT GTTATCATTT
  GTGGCTGTGC TTAATAGAAA GTTTTAATTT AAAACCTAAA ACAGTTAGTT TAAATTTTTC
  TTTAAACATG AGTATGTTTT TATGTTGTTC TGTTTTTTTT TTCTTGTTGT TTTTGTTTTT
  K
  TTTTTTTTTT TGTTTTTTGG TTTTGGTTTT TTTTGGTTTG GTTGGTTGGC TGGTCATTTT
  GTATTGGTTT CTCTGTGTAG TTCTGGCTGT CATCAAACTC TCTCTGTGGA CCAGGCTGGC
  CTCAAACTCA TAGAGATCCT CTTGCCTCTG TCTCCCAAGT TCTGGAATTA AAGGTGTGCA
  CCACCACTGC CAGCCAGAGC GTATTTTTAA AGGGTTTCTT ATAGAAGAAA AAAATGGAAC
  ACTCTTCAGA TATAATGATT CAAAACAAGA TCTTGTCATT ATGTGTTTGT AGACATTGGT
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss44994556	mCV25116240	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss146339982	ENSMUSSNP1414239	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31091508					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:176540617 () rs orientation: forward

Symbol	Name	Function Class
Rr396622	regulatory region 396622	185 bp downstream
Rr423899	regulatory region 423899	168 bp distal
Rr423900	regulatory region 423900	454 bp distal