rs31094663 SNP Detail

Summary

• ID
  rs31094663
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14464951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGG TTGATACAAT TCTTAAGGGA
  Y
  AGTTCTCTGA GACTTTCAAA AATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	WSB/EiJ
ss39253282	mCV23786413	ABI	CRAMUS_MOUSE	f	SNP	T	C					C		T
ss62079965	NES17153468	PERLEGEN	MM_PANEL2	f	SNP		C	C	C	C	T		C		C	C
ss138985325	ENSMUSSNP3027160	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C							T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	WSB/EiJ
rs31094663					SNP	T	C	C	C	C	T	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62079965	NES17153468	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14464951 () rs orientation: forward

Symbol	Name	Function Class
Abhd6	abhydrolase domain containing 6	within coordinates
Cpgi6154	CpG island 6154	1483 bp proximal
Gm30244	predicted gene, 30244	768 bp upstream
Gm62231	predicted gene, 62231	1319 bp downstream
Rr296822	regulatory region 296822	249 bp proximal
Rr404013	regulatory region 404013	1765 bp upstream
Tssr124223	transcription start site region 124223	1876 bp downstream
Tssr124224	transcription start site region 124224	1843 bp downstream
Tssr124225	transcription start site region 124225	1710 bp upstream
Tssr124226	transcription start site region 124226	1768 bp upstream
Tssr127395	transcription start site region 127395	777 bp upstream
Tssr127396	transcription start site region 127396	765 bp upstream