rs31096202 SNP Detail

Summary

• ID
  rs31096202
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:97840973 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT TAATCTATCG TCGTGAGTCA
  R
  GAACGTCTTT CTTTTTCCAA GTCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45996415	mCV23541951	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31096202					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:97840973 () rs orientation: forward

Symbol	Name	Function Class
B3gnt6	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6	649 bp downstream
Cpgi19443	CpG island 19443	1788 bp proximal
Rr651557	regulatory region 651557	968 bp distal
Rr651558	regulatory region 651558	69 bp proximal
Rr651559	regulatory region 651559	275 bp proximal
Rr651560	regulatory region 651560	1707 bp proximal