rs31096895 SNP Detail

Summary

• ID
  rs31096895
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55150282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAG GCCGGGCGCG CAGCACGGGC
  R
  GGGAAAGGTC GCCCGAGGCC CCCCG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss39253006	mCV25267223	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss139573028	ENSMUSSNP1290094	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31096895					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55150282 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6478	CpG island 6478	within coordinates
Slc22a17	solute carrier family 22 (organic cation transporter), member 17	within coordinates
Tssr128658	transcription start site region 128658	494 bp upstream
Tssr128659	transcription start site region 128659	367 bp upstream
Tssr128660	transcription start site region 128660	212 bp downstream
Tssr128661	transcription start site region 128661	239 bp downstream
Tssr128662	transcription start site region 128662	264 bp downstream