rs31096987 SNP Detail

Summary

• ID
  rs31096987
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:128342813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCACTGTT TGTACATTTG AAACTCACTC TCTGTGTGTG
  TGTGTGTGTG TGCATGGTAT GAACTCACTA ATAAGTGAAT ATTAGCCAAA ATAAAGAAAA
  W
  TTACAGAATA CCCAAGATAC AGTCCACACA CCTCAAAAAG GTCAACAAGC TGAAGTGCCC
  AAGTGAGAAA GCCTCAGTCC TACTTGGGAG AGAGAAGAA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45499688	mCV23446960	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss135883817	ENSMUSSNP1040228	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss320961073	CHEV_3_128252082	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31096987					SNP	T	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:128342813 () rs orientation: forward

Symbol	Name	Function Class
Rr497	regulatory region 497	within coordinates
Rr584942	regulatory region 584942	1775 bp distal