rs31101628 SNP Detail

Summary

• ID
  rs31101628
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130727653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGATATCGG TGAAAAGGGC AAAAGCAAAC AGATTCTATT
  TTGGGGTTGA TCATTGTACA TGTTGGCTTG AAGTTAGACA CCTACTTTAG AAGCTTCACC
  K
  AGTTTATCTT ACTGGCTTTC TGTGAAATAT AGATGTCTCA CTTTTAGGGG TCGGACTACA
  ATATCGCTGA GAGATAAGTA ACATTTGTTA AGTGGAGAA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45500402	mCV23363604	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
ss135902502	ENSMUSSNP4096421	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31101628					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130727653 () rs orientation: forward

Symbol	Name	Function Class
2010110G14Rik	RIKEN cDNA 2010110G14 gene	within coordinates
Gm64594	predicted gene, 64594	280 bp upstream
Gm64601	predicted gene, 64601	853 bp downstream
Rr585238	regulatory region 585238	1415 bp distal
Rr585239	regulatory region 585239	1363 bp proximal