rs31103272 SNP Detail

Summary

• ID
  rs31103272
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147976506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGCTGTC ATTGTTACCA
  GCACTTGCTT ATAACCTGAT TCGGGGGTAA TTAAGGACTG AAAAGGTAAT CAGGATTCAA
  GTGTCTTGAA GCTTACAATT GGGATTTGTG CTTCAAAGCC TTAGATACTT AGAAAGAAAG
  CCCCTCTGTA TGCCTTAAAA TGGTCCAAAA GTCTAATCAC CAACTTGAGA GAGTAGATAC
  K
  GCTGCTAGTC AGAGTGTGGC AGATACAGAG AGAACCCAGA AAGACCCCTC TCGTCTCTAA
  GTAAATAAAT CTACTTTCAT TGTTTACATT AATGGGCTCT GGAATCTACC CAAATGTGAT
  TGAAATCAAA GTATCCTTTA CACATCCCAA ATATACTGCA TTCATCTTTA TCCCTGGGCA
  CCAGTAGCCG GTTTATGCAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45499066	mCV22801855	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss136057860	ENSMUSSNP6230446	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
ss321014824	CHEV_3_147933834	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31103272					SNP	G	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147976506 () rs orientation: forward

Symbol	Name	Function Class
Rr587183	regulatory region 587183	1086 bp proximal
Rr587184	regulatory region 587184	1700 bp proximal