rs31104402 SNP Detail

Summary

• ID
  rs31104402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83017988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTGA GGAGGTTGGG AAATGAGCTG
  R
  GGTTATGTAG TGAAGAGCAT GGCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45499079	mCV25188550	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135411395	ENSMUSSNP369621	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss320821083	CHEV_3_82914603	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	DBA/2J	LG/J	SM/J
rs31104402					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83017988 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	64 bp distal
Rr578837	regulatory region 578837	300 bp distal