rs31105288 SNP Detail

Summary

• ID
  rs31105288
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44150251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA GGGGTGGGCT ACAGCTGGCC
  R
  TACATGTCCA GTTCCCTGAA AGGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45997884	mCV25287528	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss149113582	ENSMUSSNP6502456	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss322199071	CHEV_7_51756197	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31105288					SNP	A	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44150251 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18970	CpG island 18970	377 bp distal
Garin5a	golgi associated RAB2 interactor 5A	within coordinates
Gm44646	predicted gene 44646	862 bp upstream
Mybpc2	myosin binding protein C, fast-type	872 bp downstream
Rr646111	regulatory region 646111	746 bp proximal
Rr646112	regulatory region 646112	873 bp proximal
Rr646113	regulatory region 646113	1081 bp proximal