rs31106688 SNP Detail

Summary

• ID
  rs31106688
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180548086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCACCCCTC CTTGTAAGTT TACCGTTCAT CTCCCACCAG
  GAGTGGGTGG TAGAGTACAT TTGGCAGTCC CATTTGCCCA CCAGATGCAG CAGTACCAAT
  K
  CTGGGCAGCA GGTGGCGCAG AGAGACCCTG ACATTTAAGC TTTGACCATG GATTGTCTTG
  AATGGATCCC TAGAAAAAAA GCCTTTATCT CCCTCCTCC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss44997294	mCV24576711	ABI	CRAMUS_MOUSE	f	SNP	G		T
ss146385461	ENSMUSSNP2280193	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31106688					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180548086 () rs orientation: forward

Symbol	Name	Function Class
Gm8101	predicted gene 8101	1093 bp upstream
Rr424550	regulatory region 424550	within coordinates
Rr424551	regulatory region 424551	1 bp proximal
Rr424552	regulatory region 424552	1928 bp proximal