rs31107922 SNP Detail

Summary

• ID
  rs31107922
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:61315566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATACTATACT ATATCAAACC TTGGCTCTAT TGGTTTAATA
  GACAAAGACA TTTGGATTTT GAATGTACCT CAGTCATTCT AGCTTCTATT TTGGTGTAGC
  R
  GGAGACAGGG GGGAGACTGA GTGGTTCTCT TGGCTTATCA ACACCTTTGA ACAAATAATT
  CCTGATGCTA GTCTCCTATT TTATATCATT AGATGCTCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45500482	mCV24499785	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss135224492	ENSMUSSNP1764074	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs31107922					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:61315566 () rs orientation: forward

Symbol	Name	Function Class
Gm40061	predicted gene, 40061	within coordinates
Rr72571	regulatory region 72571	366 bp distal
Rr81199	regulatory region 81199	436 bp proximal
Tssr888	transcription start site region 888	1773 bp upstream