rs31109840 SNP Detail

Summary

• ID
  rs31109840
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83725206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTCTATGT CAAGAATAGC
  TTCTTATTTA AAGCAACTGT ATATGGTTAT GTTTAAAGGA AAAAAGACTT TCATCACATG
  GTCATCCTCA GAAAATTCCA GATGTTGGCA ACACTGCCAT TTGTACAAAC CATACCCTAT
  GATTTTAAAA TCTTAATCAT ATGTAAGGTC TTCCTCAGCC ACCTGAAAAG CCCCAACACA
  Y
  GAACAACCCA CAATTATGTG GTCAGCATCA TCATCAAGCT GTTGGAAGCT ATGATGCCAA
  TATACACTGC CAACATGGCC GGGCCTCTGT GCTTTTGCAA AGTCATTTTG GTAAGAAGAA
  ACCATGAATC TGGGCATCTT GAAGCCCAAA CCCTTCAACT GATTTCATTC TACCTGGAAC
  AGAATGAAGG ATTCTTATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45998833	mCV24976365	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss145200239	ENSMUSSNP5923554	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31109840					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83725206 () rs orientation: forward

Symbol	Name	Function Class
Cemip	cell migration inducing protein, hyaluronan binding	within coordinates
Tssr73416	transcription start site region 73416	1565 bp downstream