rs31110021 SNP Detail

Summary

• ID
  rs31110021
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126269511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCTTGAT TATTATCCAC
  CTTAGTTTTT GAGACAGGGT TTCTAATTGA ATGTGGGACT CATTGATTTG GCTAGGCTGT
  TCGGCTAATG GGCTTCAAGG ATCTGATTGT CTCTATGGTA ACTCAATGCT GGAATTACAG
  GAACACACCC TGATGTCTGG CTTTCACATA GGTGTTGGGA ATCTAACTCA GATCCTCAGG
  Y
  TTGCACAACA GGTACTTAAC TCATTGCGCC ATCTCTGTAG TCTCTCCTTT TGTGTTGGAC
  GCAAGGTCTC ACTCTAGCCC AGGCAAACCT GGAACTCATT GCAGCTAAAA TAGCATCACA
  TTCACAACAT AATTGCTGTA AACTCCTGAG TGTTGAGATT AGGTGTCATC CAGCACACCC
  ACAGGATTTG AAGCTTTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45998247	mCV23683626	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145875573	ENSMUSSNP2434298	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31110021					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126269511 () rs orientation: forward

Symbol	Name	Function Class
D930031A20Rik	RIKEN cDNA D930031A20 gene	1186 bp downstream
Rr381448	regulatory region 381448	1960 bp downstream
Sgf29	SAGA complex associated factor 29	within coordinates