rs31110215 SNP Detail

Summary

• ID
  rs31110215
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:154044154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAG ACATAGGGGT TGCTAAGACA
  W
  TAAAAGAATA ATACAACACA TTTAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss46481137	mCV22944967	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss134512691	ENSMUSSNP1544205	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs31110215					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:154044154 () rs orientation: forward

Symbol	Name	Function Class
Acot9	acyl-CoA thioesterase 9	1285 bp upstream
Cpgi23012	CpG island 23012	1192 bp proximal
Rr8395	regulatory region 8395	846 bp proximal
Rr395811	regulatory region 395811	387 bp upstream
Tssr162420	transcription start site region 162420	1289 bp upstream
Tssr162421	transcription start site region 162421	1302 bp upstream
Tssr162422	transcription start site region 162422	1353 bp upstream
Tssr162423	transcription start site region 162423	1373 bp upstream