rs31110572 SNP Detail

Summary

• ID
  rs31110572
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:132896322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GAGCAAAATC TTTTTGCAGT AAAAATTGGG GACTTGAAAG ACAATATAAT AATAATATTT
  AAAAGGACAA AGAAGAAGGA TGGAGTCACA TTTCATCCTT CTGTTGCCAT TTCTAACTCT
  CCCAGCAAGG AAAGTGATAG AAAATAAATG TTTGAGGGAT GCTCTATAGT AGTGAGCCAA
  AAAGTCAGAT GAGAGCATAC GTCCCCCCAA GAAATACTGC ATTCTCACCA AATCTGCTAG
  CACAGAATGC TCACCACCCT GTGTATGTCT CTGCATGTAC CAACTCCCTC TCTGCACGGT
  S
  TATTTTACCA GCCTTATTTA TAAACTTAAT GACGAAAGGA TTGCTTATTT GGGGTCATCA
  TAACACTGGG CAGCAAAAAA AAAAAAAAAT GAATCCAAGG GACAAGATGT TCCACACATA
  CCTAATAGTA CTGTTTCTTT TGAGAGACAC GGTAATCAAA TAGCAGGGAT TTTTTTTTGC
  TCTTTGGATT CTGAGGGAAA ACAAAATGAC CTTGGCATCT ACCAAGTAAG CTACAGTTCC
  AAAGATTGAA GTTATTGCCC ACAATAAGAT TAGATTCTTC CCTGTGGAAA CACATTTATG
                                                                   
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss46480975	mCV25181970	ABI	CRAMUS_MOUSE	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs31110572					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:132896322 () rs orientation: forward

Symbol	Name	Function Class
Rr6669	regulatory region 6669	269 bp proximal