GCTTGAGGCT GGCTAGCAAG CAAAGAGGCT TCCTCAAGGA AGGTATTACT AATCCGTGGT TTTCACACTT ACAGCCTCAT TCATAGCATT AGTAAACGGC CCAGGGACCA GAGGATAGGG CACCCAAATG AGCTGTGAGA ACCATCTCTG TCCACCTGAG ACAGGCAGCT CTCGGAGCTA CAGAGTGCTC ACAGTTCCAA R TTGAAGAAGG GTTTGCCCGT CTCGGAAAGG ATCCCGGTGG AAATTCAATT GAGTCCACTG GCTTCATCCG TGGACCAGCG AGGCTCCCTG TAGCATTTGA AGGTTCGCCC GTTTTGGCAG CTCTGAAGAT CAAACCCAGC ACCTGCTAGG CTGACAGTGT AGCACTGAGC TCCATTCCAG TCCTGCTATT TCAAGTCTTG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss47018668 | NES10852648 | PERLEGEN | MM_PANEL2 | f | SNP | A | G | G | G | A | G | G | G | G | G | G | G | G | G | G | |
ss136030753 | ENSMUSSNP4666270 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | ||||||||||||||
SNP Consensus Information | |||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs31116073 | SNP | A | A | G | G | G | A | G | G | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47018668 | NES10852648 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr3:144103712 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi13898 | CpG island 13898 | 1160 bp distal | ||||||
Gm65349 | predicted gene, 65349 | 1212 bp upstream | ||||||
Rr586643 | regulatory region 586643 | 1233 bp distal | ||||||
Rr586644 | regulatory region 586644 | 1063 bp distal | ||||||
Rr586645 | regulatory region 586645 | 1359 bp proximal | ||||||
Rr586646 | regulatory region 586646 | 1975 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/25/2025 MGI 6.24 |
![]() |
|