rs31116384 SNP Detail

Summary

• ID
  rs31116384
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111859157 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGACCCTAA GTGAAGCAGG
  CTTTCTCTGG GAACCTGTGA GGCAAGCCCA TCAGAGAAGC AAGTAGGTTG GCCAGCTTCA
  GATCTTTACT CTTCCTCTGC TCCCTATTCC CCAGTCTCAT ACTCAGCTTT GTAGCAGACT
  ACCTGTGCAG TTTCTCCTCA CTTTCTGCCT CCATCTCCAG GGAAGTAAGC AGATTCCGAT
  R
  TCAAATTAAC TTACAAAAAT CAGTAGTGCT ACTATATATA AATGATAAAC TGACTGAGAA
  CAAAATCAGG AAAGCAACAC CTTTCACAAA AGCCTCAAAT AATAGAAAAT ATATGGAATA
  ACTCTAACCA AGCAAATAAG AGACACATAT GACAAAAAAT CAGTGACAGT GAGTGACTAT
  GAGCAAAATA CAATGATCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46483986	mCV24020428	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss134277709	ENSMUSSNP1553497	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss325913343	CHEV_X_110063069	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31116384					SNP	G	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:111859157 () rs orientation: forward

Symbol	Name	Function Class
Rr2637	regulatory region 2637	244 bp proximal
Rr6449	regulatory region 6449	427 bp proximal