rs31116753 SNP Detail

Summary

• ID
  rs31116753
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:9166724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAGCACCCAT ATAGCAATTC TCAACCACTT GTAATTCCAG GTTAAGGGGA TTAAGTGCCC
  TCTTCTGAAC TCTGCAGGCA CCAGGCCTTT ACACATACAC ATAAAAAATA AATAAATAAA
  GACAAAGAAG TACTGGTAAT TCTACTGGAG AAATATCCAA TTCCAAATGG TCAGCTTTGA
  AAACATACAT AATGAGTAAC GTTATACAGA GTGAGCAGCT TACATTTAGG GATACACGGA
  AACACTCTTA TGTGCGCATG CACACACACA CACACACACA CACACACATA CACACACATA
  Y
  ACACACACAC ATATATACAC ACACACTAAC TATTAATGAA AAAAGAGGCC ATGGATTTAA
  AATAGAGTAG TGAGCAATAT GTGAGAATGA TAAGGGAGGG GGACATGCTG TAATCAAAAT
  ATAATATAAA AATAAAGGAG ATAATGTTTT TAAATTGGAA TGTATTTTAT CCTTCTTGGT
  TTAAAGCCTT GAATAATGTG ATTTTACTTT GTTCAAGAGA AGGCCTCAAA GTAGCAAATC
  AACCTGGGTG AATCTCAAGC TCAGTCAATT GAAATCTGTC CTTCAGTGTT TGTGAGGGCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss46482750	mCV22669476	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs31116753					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:9166724 () rs orientation: forward

Symbol	Name	Function Class
DXMit136	DNA segment, Chr X, Massachusetts Institute of Technology 136	within coordinates
Rr689856	regulatory region 689856	1510 bp distal
Xk	X-linked Kx blood group	within coordinates