rs31118445 SNP Detail

Summary

• ID
  rs31118445
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151025867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCTTTCC ACCTTTGTGG
  ATCCTTGGAA GTCCATCTGT ATAATCTATG TATTTTAGGT AAGTTTATTA GCAATCTTAA
  TTTCAGTTGC AACTCTAACT CCCCTTTGCT GTGTAATCTA ATTCACTCAT GGATCTTAGC
  AATTGGAACG TTGATGTCCT TGGGGGATAC ACACTACCAG CACACCCTAA AGTGTGGACA
  S
  ATGTGAGGTA TGCTCACTCT ACAAGTGTGG ACACTTAAGG TGATGGGGAA ACTTAGAAAT
  TAGAATCCAT TCTGGCTGGT TGAACAAAAT AACAACCCAG TTGATGTTAT TGAATGCAAT
  TCCCATAGTC ACCTACATGG GAAGGTCATT GTAGAAAAGC TCTGGACGAG CCAGAATCAC
  ATAAAGGAGA GAGGTACCAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ
ss49704753	NES13067801	PERLEGEN	MM_PANEL2	f	SNP	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	KK/HlJ	MOLF/EiJ
rs31118445					SNP	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49704753	NES13067801	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151025867 () rs orientation: forward

Symbol	Name	Function Class
Gm36139	predicted gene, 36139	within coordinates
Gm70948	predicted gene, 70948	1296 bp upstream