rs31118630 SNP Detail

Summary

• ID
  rs31118630
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30449683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTCCAGGT AGACATACTG GGGAGGATTC ATTACCTGCC
  CTTCCTTCTA ATGCCAGACT TTAGCCCCAG GCCGGGCTTG CATCTCCGTC CCCCTATACT
  Y
  GGAGCCAACA GTACAATGCT TGGGGCTTCA GGTCAGGGCA CTGGAGGCCC CAGGGGAGCA
  GAGAAGGAAG GAGAAGGTCC TGGCCCCCAG CCCACATGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45999111	mCV25317240	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss148687346	ENSMUSSNP2868276	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
ss322136402	CHEV_7_31535277	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31118630					SNP	C	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30449683 () rs orientation: forward

Symbol	Name	Function Class
Rr644909	regulatory region 644909	79 bp distal
Sbsn	suprabasin	1213 bp upstream
Tmem147os	transmembrane protein 147, opposite strand	within coordinates
Tssr65808	transcription start site region 65808	1268 bp upstream
Tssr71856	transcription start site region 71856	1899 bp downstream