rs31122967 SNP Detail

Summary

• ID
  rs31122967
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115834097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCTAGTTT GAGGTTTCTG
  GTGGGTGGAC TGAATGATTT CTAGTGTTCT GTAGCCCAGT GGGGTAACTG TGGTGGAAAA
  CAGCTAATTG AATATTTCAA AATAGCTAGT AGAGAGGATC TGAATGCTTT CAATACAAAG
  AGATGGTTAA TTACAGAAAC AATGGATAGG CTGATTGTCA ATCTCTGGTC ATTGCATTTT
  R
  TTAAAATGTA TCAAAATGCC ACACTGTGCT TCATAAATAT GTACAACTAC ATGCCAAGTT
  TAAAAGTACA CAACACAGGT GAACATATGT GTGTGTGTAG AGAGAGAGAG AGAGCATGAA
  AATAACCCAA ATTTCTATTA TTTATTAAAG GATAAACACA GCTAACTACT GATATTTGCA
  CCAGCAAGAC TGAATCTACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45500310	mCV23906233	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss135668204	ENSMUSSNP3498579	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31122967					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115834097 () rs orientation: forward

Symbol	Name	Function Class
Rr583646	regulatory region 583646	516 bp proximal