rs31123362 SNP Detail

Summary

• ID
  rs31123362
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156840001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGAAGATTA AAATACTGTA GCCCAGTCTA CATAACAGAA
  ATAGCATGTA CAGGGTAAGT GAAAGCCACA CGTGGAGTTT GCATTTTTTA GATAATAATA
  Y
  TTAAAAAAGA AAGAGTAAAC ACTACCAAAC CAAATTGGAA TATTTATAAA CATGGACCCA
  TAAACTTAAT GGCCATCCTC TTTCTTAACC AGTGCGGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44998688	mCV24594831	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss145811807	ENSMUSSNP5564184	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31123362					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156840001 () rs orientation: forward

Symbol	Name	Function Class
Gm28694	predicted gene 28694	within coordinates
Gm70243	predicted gene, 70243	within coordinates
Rr421310	regulatory region 421310	460 bp proximal