rs31128623 SNP Detail

Summary

• ID
  rs31128623
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18514270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTATTTTAA TTTGGCATTT TTGTTTTTTC AAGAATGAAT
  GCATACTCTG TGGAAACATG GGGCATATCA TAATCCTAGT TCTGACTACT TTGATCAGTT
  K
  CTGGTTTTCT TGTAGTGCCT TTAGAACCTC TTTAAGCATC AAGTCTTTGT GGATTTGACC
  ATAAGTAGAA TTCTGATTGA CTATTTAAAG CTCTGCTAA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45500684	mCV25065163	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss134658354	ENSMUSSNP3633660	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31128623					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18514270 () rs orientation: forward

Symbol	Name	Function Class
Gm30667	predicted gene, 30667	within coordinates
Gm65525	predicted gene, 65525	within coordinates
Rr573905	regulatory region 573905	241 bp proximal