rs31128643 SNP Detail

Summary

• ID
  rs31128643
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:60386022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATTCAAGGCA TGACATTGAA GACCAAGACC TCTGTCCCTC AAGGACCTCA TGGAAAGGGA
  AGAAGGTTAC AAAACACTTG TTACTATATC TGATCACTGG TTTTGTTCCT TATCAACACA
  GTGCTGTCTC TTCTAGTGGA CTTCTGGCCT CAGTGAAAGA GGAAGAGTCT AGCCTCACAG
  AGACTTGAAG TGCCAGGGTG GTGGGACACC CAGGGGGCCC CCACCCCTTA GAGAATACAG
  TGAGATTGTG GGAGGGGGTT GCCTTGAGGA AGGTAGTGGT CAGGATATAA AGTGAATAAG
  Y
  AAAAATAAAT AAGTAAGTAA ATAAATAAAT AAATAAAATT TCTCAGGGAC AGAGATTATG
  ACCTAATCAT AGACCAGTGC CTGACACAAT AGAGGCCTTC AGCAAAGCAG GCTAAAGGTA
  AATAAATAAA ATGAGTAGGC CCTAGGAAAA TGGATAGGTA ATGAATAAAC CAGCAGATAA
  ACAGATAAGC AAAGAATGGA CAGATTCAGT AGAGCTTAGG GTGGGGAGAA ATGAAAGGAA
  TGGATTTACT CATGATGAGG CAGAGCTGAA CATCCCGGGG CTGTCCTCTG TAACTCAGTG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39257062	mCV24382220	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss139602492	ENSMUSSNP1208327	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs31128643					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:60386022 () rs orientation: forward

Symbol	Name	Function Class
Rr389732	regulatory region 389732	within coordinates