rs31131221 SNP Detail

Summary

• ID
  rs31131221
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127574748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGGAAACA ACATGGTTAA
  GAATGGTTTT CAAGATGAAA TTAAAAATTG TTCTACAAGG GTTGTCTTTG GTGTAAAAGT
  TTGGAGAAAC TGGATGGATG CACTTTACAT TGCTGGTGTT GAGCTTACTA TGCTTCTCTT
  GTGAGAGAAC AGGGCCAAGT TATGTATGAG TTGGTTGGTT AATTTAAAAG AATTACTAAT
  K
  CCCCTACCCC CATCTGTGCT GAGGACATTT CCCAGCCCTA GCTGGGGGAA AACAGCATTT
  TCTTGAAGTG TGTGGCATTA TCAATGGGGA TTCAAAGTAG CAGATCTTAA GAAAGAGGCC
  CTTGTCTCCG TCTAGAATTT TCTCCATTGG GAAGGCCTCA GGATAGGGTT TGGAGAGAGG
  CTGGAAGCAA TTACCTAATA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45999703	mCV23385168	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T	T
ss145883396	ENSMUSSNP6332384	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31131221					SNP	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127574748 () rs orientation: forward

Symbol	Name	Function Class
Fus	fused in sarcoma	within coordinates
Tssr69329	transcription start site region 69329	1947 bp downstream
Tssr69330	transcription start site region 69330	1169 bp downstream