rs31134042 SNP Detail

Summary

• ID
  rs31134042
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180537026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCATGAGGGA AGGATCTGCT CACACTTCAA AACTCTACTC
  ACTCTCTGGA CTCCCACATC TCAGGATGGG GGTGGGGGTG GGAGTGGGGG AGCGAGAGCC
  K
  CCTGCCTCAG AACTCTGCTA CCTTGCCCGG CCACACAAGA GCACGAGAAA TCAAGCCATG
  TCCTCTCTGA GCACCCCTGA TGAGTGTAGT CTTGAGATA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44999297	mCV24577336	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T
ss146385127	ENSMUSSNP3874796	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31134042					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180537026 () rs orientation: forward

Symbol	Name	Function Class
Rr424548	regulatory region 424548	1354 bp distal
Rr424549	regulatory region 424549	within coordinates