rs31135841 SNP Detail

Summary

• ID
  rs31135841
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191176276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTAATTTC TTTATCCTTA
  ACACTGAATT AGTTTAAGAA CTAACAAGCA TATTAAAACA GGAAGGAAGA AAGAAAGGGA
  AGAAAGCCGA ATGAAGGAGG GAAAAATTCA AGCATGATGG TGCATGTCTA TAATCCCAGT
  ACCCAGGAGT CTGAGGCAGA ACGATTAGGA GTTCAAAGTT AGCCACCACC ACCCCCCCCC
  M
  CACACACACA CATAATGGGG AATGAAAATC CTGGGGACAT GACAGCATAC TGAGTCTAGT
  TTTGTAGGCC TTCCAGTGGC TCTGAACAGT GTCTCTCAAA TCCATTCTCC TCTGTGTTTG
  ATCTTTCAGC TTCCACTCCC TGGTATTAAT ATAAAAATAG GATGCATTTA TATGTGCTAA
  GTCACCATGA TGACTTTTGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45000286	mCV23930946	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
ss146505906	ENSMUSSNP783182	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31135841					SNP	C	C	A	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191176276 () rs orientation: forward

Symbol	Name	Function Class
Gm32200	predicted gene, 32200	within coordinates
Rr372646	regulatory region 372646	1558 bp upstream
Tssr15793	transcription start site region 15793	1724 bp downstream