rs31136055 SNP Detail

Summary

• ID
  rs31136055
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  ChrX:51238533 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTTATTAAC ACTTTTCCTC CCTTGTGGAT GTTAAACACC
  TCCTAATATC ATATTTACAT CACTCATTTG ATTAGCAAGC CCCCCTTTTT TTGACACATG
  M
  TGTATGTGTA ACATGTTATC ATAAACATGT TCTTCCCCGG AATTCCATTT TATTTAATTC
  ACTCTGAAAC TTAGAGGCAA CCAAGAAAAT GATCAGGGC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46486013	mCV22641145	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	C
ss134172261	ENSMUSSNP401303	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss325890843	CHEV_X_49502833	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31136055					SNP	C	A	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:51238533 () rs orientation: forward

Symbol	Name	Function Class
Gpc4	glypican 4	Intron
Rr691243	regulatory region 691243	1478 bp proximal