rs31137145 SNP Detail

Summary

• ID
  rs31137145
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:38797016 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTG TGTTCTCCCA GAAACAAAGC
  R
  ATTTTGTGTC ATCCCCCTCC CCATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss44999822	mCV24520860	ABI	CRAMUS_MOUSE	f	SNP	A	G						G	A
ss63267114	NES17479379	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	G	A		A	A	A		G	A	G	G		A
ss146369187	ENSMUSSNP3868481	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							A
ss325802978	CHEV_19_38883062	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs31137145					SNP	A	G	A	A	A	G	A	G	A	A	A	A	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63267114	NES17479379	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:38797016 () rs orientation: forward

Symbol	Name	Function Class
Noc3l	NOC3 like DNA replication regulator	within coordinates
Tssr159136	transcription start site region 159136	1395 bp downstream