rs31137791 SNP Detail

Summary

• ID
  rs31137791
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43058325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTAAAGCT TATGCCTCTG
  TCTCCGACAG GGCCTCAAGG TCAGATGGAG AGCTACTTCC TACAGGTGCA GAGAATTGTG
  AAGGCACAGG AGGGTCTGTG CATCTTCGTG CCCTGCTCCT TCTCCTCCCC TGAGGGAAAA
  TGGCTTAACC GTTCCCCACT TTATGGCTAC TGGTTCAAAG GCATCAGAAA ACCATCACTT
  W
  CATTTCCAGT GGCCACAAAT AACAAAGATA AAGTGTTAGA ATGGGAAGCC CGAGGGCGCT
  TCCAGCTCTT GGGGGATATC TCTAAAAAGA ACTGTTCCTT GCTAATCAAA GATGTTCAGT
  GGGGAGACTC AACAAACTAT TTCTTCCGGA TGGAGAGAGG ATTTGAGAGA TTCAGTTTCA
  AGGAGGAGTT CAGGCTACAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46000253	mCV22794620	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss149071748	ENSMUSSNP5310562	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31137791					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43058325 () rs orientation: forward

Symbol	Name	Function Class
Rr645953	regulatory region 645953	687 bp distal
Rr645954	regulatory region 645954	327 bp distal
Siglecg	sialic acid binding Ig-like lectin G	within coordinates
Tssr65984	transcription start site region 65984	690 bp downstream
Tssr65985	transcription start site region 65985	681 bp downstream
Tssr65986	transcription start site region 65986	645 bp downstream
Tssr65987	transcription start site region 65987	628 bp downstream
Tssr65988	transcription start site region 65988	616 bp downstream
Tssr65989	transcription start site region 65989	383 bp downstream
Tssr65990	transcription start site region 65990	362 bp downstream
Tssr65991	transcription start site region 65991	351 bp upstream
Tssr65992	transcription start site region 65992	362 bp upstream
Tssr65993	transcription start site region 65993	395 bp upstream
Tssr65994	transcription start site region 65994	508 bp upstream