GGTGG GCTACAGAGT AAGTTCAAGG Y CAGCCTGGGC TACTTAGCAA GAGCC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss46000520 | mCV25295192 | ABI | CRAMUS_MOUSE | f | SNP | C | T | T | C |
ss149142212 | ENSMUSSNP6214709 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
||||
rs31138019 | SNP | C | T | T | C |
Location: Chr7:45352641 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Car11 | carbonic anhydrase 11 | within coordinates | ||||||
Cpgi19081 | CpG island 19081 | 1309 bp proximal | ||||||
Rr400318 | regulatory region 400318 | 1497 bp upstream | ||||||
Rr646547 | regulatory region 646547 | 1381 bp proximal | ||||||
Tssr66612 | transcription start site region 66612 | 1968 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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