rs31141123 SNP Detail

Summary

• ID
  rs31141123
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:107353421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGCTCAG GTAGGCTCTT
  GATGAGTCTG CATTCCTCAG AGAGTACCTG GCTAGTAGGG ATAATGGGTG GTGGCTCTAG
  TGCCAGACAT ACTCAGAAGT GTCTCTGCCT TTCTCTCTAG ACCACTTAAG GCAATTACTC
  TTTTTCCTCA GGCACCCAGG CCACGCTGAA GGGCTTGGAG CAGGACTCTC TTATGTCTAG
  R
  AAGATAAAGA AAAGAGCTCC AATTCAAGTC TTCCCTGTGG AGACCAACTT GCCTTTTTTG
  GAGAGTGGCA CAATCACTAT GGGCCTGACT GGATGTGATA GAGTTACCTG GCCTAAGACA
  GTGGCTCTGG CATTGGCCAC TCAAAGTCCC AGTGTGGCCA GTTAAACGGG ACAAGGGCCT
  CCATGCTGTG CATGTCTAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45502350	mCV24801941	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31141123					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107353421 () rs orientation: forward

Symbol	Name	Function Class
Kcnc4	potassium voltage gated channel, Shaw-related subfamily, member 4	Intron
Rr582975	regulatory region 582975	795 bp proximal