rs31141187 SNP Detail

Summary

• ID
  rs31141187
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83727163 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAATCCAC TCAAGCTTGC
  TCTCTGTACA GTCCACTGGG GGGCTGATCT CTACTGTTCA TTTGAGAAAG AACAGCTGTG
  TCCCACCGCA CAGAGACAAG CCAGGAACAA GTGTCCTACC AGACAGCAAG ACAAATGTCT
  TCTACAGGAG GCAGGTGACA GGGCAGGGAG GCATGAGGAC CTGAGTTTGG TCCCCAGAAG
  W
  AGTGGCTTGT GCCTATAATC GCAGCTCTGG GATTATATAT TATTATCTAT ATTGTGAGTG
  GCCATTACAA GTTCACTGGC CAACTCACAG TTGAATCTGT AAGCTCCAGG TTCAGTGAGA
  TGTATTTCTC AAAACAATTA GATAAAAAAA ACAACTGAGG AAGATGTTGA CCTCTGGCCT
  CTACGGGCAT GCACAAATAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46000461	mCV24976377	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss145200264	ENSMUSSNP3976846	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
ss322295428	CHEV_7_91226465	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31141187					SNP	T	A	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83727163 () rs orientation: forward

Symbol	Name	Function Class
Cemip	cell migration inducing protein, hyaluronan binding	within coordinates
Tssr73416	transcription start site region 73416	390 bp upstream