rs31143894 SNP Detail

Summary

• ID
  rs31143894
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:70203865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTTTGCA GACTCACAGA
  TAACATGGTC CAGAGTAATT CACAGGTTGG GAAAAGCTGC AGTGTCCCAG GCTGGGATGG
  CTGATTGACA TCCATTTGTC AAAGCACTTT GGAAACTGTT GAAACCTCTA TTGCTTTGTG
  AACTAGTGTT GTCCTTTAAA AAGGGGGTGG GGTGGGGGGC TAGAGAGGTT CAGTGACACC
  R
  TCCACTGACA CCGGTAGTAT ACTGTAGTAG CTGCAGGTGT TAGATGTGTG CCCCAGACTC
  TAACCCATTC ATACCATGCT ACACCTTTGT GGGGTCCCAC GATGTCCATC AGTCCCATTG
  TGTCCAGTGA CTACTGTGTC CCCTCTGTAA GATGAAAACA ATCTCTGCCT CCCTTCTCAC
  GACTCCAGCG CACTCCTGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39258217	mCV24339960	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss139679368	ENSMUSSNP5403156	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31143894					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70203865 () rs orientation: forward

Symbol	Name	Function Class
Pebp4	phosphatidylethanolamine binding protein 4	within coordinates
Rr293348	regulatory region 293348	936 bp proximal
Rr293349	regulatory region 293349	1936 bp proximal
Rr300152	regulatory region 300152	66 bp distal
Rr389823	regulatory region 389823	within coordinates