rs31144041 SNP Detail

Summary

• ID
  rs31144041
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:30331881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTC CAGGCCTTCT AGGGGTGAGG
  R
  CAAGGCCGAG TCAGTCCTGG AGCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39258505	mCV23919233	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	A
ss139231666	ENSMUSSNP2094366	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
ss324576617	CHEV_14_31423110	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31144041					SNP	A	A	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:30331881 () rs orientation: forward

Symbol	Name	Function Class
Gm62449	predicted gene, 62449	377 bp downstream
Prkcd	protein kinase C, delta	within coordinates
Rr288069	regulatory region 288069	1920 bp proximal
Rr292185	regulatory region 292185	281 bp distal
Rr404042	regulatory region 404042	1874 bp downstream
Tssr127876	transcription start site region 127876	747 bp upstream