rs31145546 SNP Detail

Summary

• ID
  rs31145546
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10184216 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATTTGGGGG TTTGGTTTGG TCTTGTTTTG AGACAGGGTC
  TCACTGTGCA GACATGGCTG ATGTCAAACT CATGGGGTCC ATCTGCCTCT GGAGAGTGCT
  R
  GGATCACAGG AATATACAAC TCCACCCGGC AGAAAGGTGA AGTGCTCATG TCCCAGCTGT
  ACTAGGAGCC ATACATGACT AGAGGCTAGA GGCGATTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45000665	mCV23259586	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	A
ss146041406	ENSMUSSNP2063762	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A		A
ss325720148	CHEV_19_10281342	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31145546					SNP	G	G	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10184216 () rs orientation: forward

Symbol	Name	Function Class
Myrf	myelin regulatory factor	1420 bp downstream
Rr356596	regulatory region 356596	216 bp distal
Rr361277	regulatory region 361277	629 bp proximal
Rr362959	regulatory region 362959	1415 bp distal
Rr363809	regulatory region 363809	1985 bp proximal
Tmem258	transmembrane protein 258	within coordinates
Tssr155040	transcription start site region 155040	373 bp downstream