rs31145632 SNP Detail

Summary

• ID
  rs31145632
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110077721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGTGGCTC ATGCCTTAGT
  CTGTGGACAC TTCCTAATCT GTTGCGTTAA ACCCCTGGGG AAGAACATAA TGTAAAAAGG
  CGCCTGCATC AGAAGGCGCC TATATCTCCG TTTTTAAGTG TGGCCAAATT TCTTTCCACT
  GGGATAGTGT GTTCTCAGTA CTGGAGGGTT ATTAGTTATG ATTGGAGGTT AAAAATTAGT
  W
  AAAAATTCTA AAATGTGATT AGTTAAGCTA GATCAATTGC ATTGCTTCTA GAATTGACTG
  TTTTCAAATA GCTCCCCAAA TGTTATAGCC AGAGGATAGA AATGGAGCAA GGTGACAGGG
  CAGGGCAGGG GGCGGGGGGA TGGGTCCTAA AGACAGCGGT AACTAAAATT GCTGTTCCTT
  AGGGAATGGG AAAACAGCAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47521552	NES11196905	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	T	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs31145632					SNP	A	A	A	A	A	A	A	A	A	T	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47521552	NES11196905	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110077721 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21012	CpG island 21012	1912 bp proximal
Rr669673	regulatory region 669673	1112 bp proximal