rs31147261 SNP Detail

Summary

• ID
  rs31147261
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:105762073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAGACATTG TATTTTTAAC ATAATCACTT CTTTAACTCC
  ATTAAAACCA CCCTCTCTAT CCTTCTATCC CTTTCCAGAC AACTTTGAGA TTTATTACTT
  Y
  CATTTATTTC CTCTTTGAAC TCAACTTTTG TGTTGCTCAG CTAGTGCTGG GTGTGGGGCC
  TGACCTGGAG TGTAGTTGAC CTACAAGTAG TCATATCAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46487049	mCV24603344	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss134262002	ENSMUSSNP4049501	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31147261					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:105762073 () rs orientation: forward

Symbol	Name	Function Class
Rr2553	regulatory region 2553	873 bp distal