rs31148472 SNP Detail

Summary

• ID
  rs31148472
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52014942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCA GCAGAGTACC TTGGTTCCCA
  R
  GATCCGCATG GTAGTTTACA ACAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45505004	mCV22342033	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss320763388	CHEV_3_51911443	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31148472					SNP	A	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52014942 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13152	CpG island 13152	1780 bp distal
Gm65327	predicted gene, 65327	within coordinates
Rr77597	regulatory region 77597	1741 bp distal
Rr83056	regulatory region 83056	336 bp proximal